2.2.3 (2016-08-19)

Bugfixes:

• fix a bug in align module

2.2.2 (2016-08-16)

Improvements:

• update logic of annotate step
• update build index module

2.2.1 (2016-08-08)

Improvements:

• chang option '-p' to '--pe' in parse module
• add 'fast_circ.py'

Bugfixes:

• bug in align module because of parse module

2.2.0 (2016-08-04)

Improvements:

• add paired-end data parsing function

2.1.2 (2016-07-22)

Improvements:

• add '--low-confidence' option

2.1.1 (2016-07-20)

Bugfixes:

• bug that ignores case-sensitivity in fusion fix step

Improvements:

• improve fusion junction identification efficiency for BWA

2.1.0 (2016-07-04)

Improvements:

• support for BWA

Bugfixes:

• change module name from 'circ' to 'circ2' in case of conflict with CIRCexplorer (issue #1).

2.0.1 (2016-06-21)

Improvements:

• test on PyPI and Bioconda
• lots of code improvements

2.0.0 (2016-04-05)

Features:

• pre-release for CIRCexplorer2